Basic Information
Locus ID:
gene-LOC103714235
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 10721670 | 10743698 | + | gene-LOC103714235 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 102,078.23 Da | 55.54 | 60.03 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 651 | 695 | 0.00723984 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 648 | 690 | 5.72E-7 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 44 | 243 | 6.72E-8 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 648 | 696 | 5.8E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 733 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 610 | 634 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 575 | 590 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 498 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 946 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 646 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 788 | 918 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 294 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.1 | 0 | |
| RefSeq | XP_008799642.2 | uncharacterized protein LOC103714235 isoform X1 [Phoenix dactylifera] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CIG5 | uncharacterized protein LOC103714235 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103714235 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology