Basic Information
Locus ID:
gene-LOC103714188
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Receptor protein kinase CLAVATA1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 8201202 | 8207434 | + | gene-LOC103714188 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.84 | 108,642.89 Da | 33.13 | 100.30 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 1.4E-5 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 363 | 376 | 0.77 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 703 | 970 | 5.2E-44 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 243 | 265 | 0.39 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 267 | 325 | 5.7E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 169 | 226 | 1.6E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 77 | 399 | 1.65E-67 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 362 | 617 | 3.26E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 697 | 976 | 7.69E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 342 | 626 | 3.5E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 226 | 6.7E-49 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 778 | 980 | 5.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 777 | 9.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 227 | 341 | 1.0E-32 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 289 | 312 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 191 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 506 | 530 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 152 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 362 | 385 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 700 | 979 | 1.2E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 700 | 980 | 36.442413 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_008799579.2 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Phoenix dactylifera] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | A0A8B7CID4 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Phoenix dactylifera OX=42345 GN=LOC103714188 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology