Basic Information
Locus ID:
gene-LOC103714078
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 220355 | 222690 | - | gene-LOC103714078 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 45,250.81 Da | 62.31 | 75.78 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 135 | 178 | 3.92481E-17 | - |
| Pfam | PF13639 | Ring finger domain | 135 | 178 | 4.2E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 117 | 183 | 4.8E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 110 | 185 | 2.3E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 136 | 177 | 1.4E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 136 | 178 | 12.69582 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 240 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05810.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_008799433.2 | RING-H2 finger protein ATL43 [Phoenix dactylifera] | 0 |
| Q5EAE9 | RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7CHQ6 | RING-H2 finger protein ATL43 OS=Phoenix dactylifera OX=42345 GN=LOC103714078 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology