Basic Information
Locus ID:
gene-LOC103713136
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 2051683 | 2056041 | + | gene-LOC103713136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 72,555.89 Da | 38.59 | 85.74 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 73 | 5.9E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 127 | 186 | 4.7E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 365 | 631 | 1.2E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 365 | 634 | 1.36E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 218 | 4.54E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 147 | 8.5E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 438 | 655 | 1.2E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 437 | 7.2E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 241 | 1.1E-19 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 362 | 637 | 25.304819 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 368 | 390 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 635 | 669 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_008798178.1 | pollen receptor-like kinase 1 [Phoenix dactylifera] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CFI8 | pollen receptor-like kinase 1 OS=Phoenix dactylifera OX=42345 GN=LOC103713136 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology