Basic Information
Locus ID:
gene-LOC103712660
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 7826639 | 7846051 | + | gene-LOC103712660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.31 | 85,833.19 Da | 53.47 | 72.85 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 497 | 743 | 3.15584E-130 | - |
| CDD | cd00130 | PAS | 125 | 226 | 2.31313E-14 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 492 | 742 | 5.9E-67 | IPR001245 |
| Pfam | PF00989 | PAS fold | 117 | 223 | 5.5E-12 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 114 | 226 | 1.69E-19 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 466 | 741 | 7.01E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 484 | 568 | 1.0E-30 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 126 | 229 | 1.6E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 569 | 775 | 2.0E-63 | - |
| SMART | SM00220 | serkin_6 | 491 | 744 | 3.8E-55 | IPR000719 |
| SMART | SM00091 | pas_2 | 116 | 183 | 1.8E-8 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 114 | 226 | 1.0E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 491 | 753 | 42.675507 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 114 | 185 | 17.28194 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 610 | 622 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 714 | 736 | 1.3E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 670 | 692 | 1.3E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 651 | 661 | 1.3E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 604 | 622 | 1.3E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 565 | 578 | 1.3E-10 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 775 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 449 | - | - |
| Coils | Coil | Coil | 5 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67890.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_008797466.2 | serine/threonine-protein kinase pakF-like [Phoenix dactylifera] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CEN1 | serine/threonine-protein kinase pakF-like OS=Phoenix dactylifera OX=42345 GN=LOC103712660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology