Basic Information
Locus ID:
gene-LOC103712647
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 7701251 | 7708211 | + | gene-LOC103712647 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 64,549.20 Da | 63.00 | 51.67 | -1.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 540 | 571 | 8.0E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 442 | 523 | 6.7E-20 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 442 | 524 | 9.3E-30 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 236 | - | - |
| Coils | Coil | Coil | 480 | 501 | - | - |
| Coils | Coil | Coil | 431 | 468 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_026662550.2 | eukaryotic translation initiation factor 5B-like isoform X1 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B8J817 | eukaryotic translation initiation factor 5B-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103712647 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology