Basic Information
Locus ID:
gene-LOC103712574
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 28527170 | 28540947 | + | gene-LOC103712574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 206,841.58 Da | 47.52 | 72.77 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 385 | 657 | 1.67413E-139 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1558 | 1821 | 1.1492E-148 | IPR044769 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 101 | 3.9E-18 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1597 | 1763 | 6.7E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 406 | 651 | 4.0E-32 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 451 | 623 | 1.39E-42 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1557 | 1821 | 6.08E-79 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 103 | 6.72E-20 | IPR011011 |
| Gene3D | G3DSA:3.30.810.10 | - | 1680 | 1822 | 4.7E-42 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1537 | 1678 | 2.2E-35 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 450 | 623 | 3.1E-54 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 24 | 108 | 1.4E-21 | IPR013083 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 3.9E-21 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1535 | 1822 | 6.3E-125 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 13.24963 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1505 | 1821 | 57.824551 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1833 | 1857 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1339 | 1358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1261 | 1288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1339 | 1363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1840 | 1857 | - | - |
| Coils | Coil | Coil | 1122 | 1156 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_008797351.2 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CE67 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Phoenix dactylifera OX=42345 GN=LOC103712574 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology