Basic Information
Locus ID:
gene-LOC103712566
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 28383063 | 28402281 | - | gene-LOC103712566 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 200,398.81 Da | 52.87 | 65.62 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04301 | NAT_SF | 1377 | 1437 | 0.00160138 | - |
| CDD | cd15532 | PHD2_CHD_II | 1182 | 1221 | 6.23601E-17 | - |
| Pfam | PF16135 | Tify domain binding domain | 1103 | 1153 | 2.4E-17 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 1372 | 1445 | 1.02E-5 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 1172 | 1228 | 1.71E-12 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1171 | 1261 | 1.5E-16 | IPR013083 |
| SMART | SM00249 | PHD_3 | 1181 | 1222 | 1.2E-10 | IPR001965 |
| SMART | SM00249 | PHD_3 | 1225 | 1282 | 5.9 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 1179 | 1224 | 9.943899 | IPR019787 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 801 | 821 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 869 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 827 | 855 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 997 | 1017 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 968 | 1046 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 970 | 996 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 763 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 720 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 721 | 736 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 756 | - | - |
| Coils | Coil | Coil | 237 | 257 | - | - |
| Coils | Coil | Coil | 76 | 96 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05380.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein. | 0 |
| RefSeq | XP_008797340.2 | uncharacterized protein LOC103712566 isoform X1 [Phoenix dactylifera] | 0 |
| F4IXE7 | Increased DNA methylation 1 OS=Arabidopsis thaliana OX=3702 GN=IDM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CEE7 | uncharacterized protein LOC103712566 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103712566 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology