Basic Information
Locus ID:
gene-LOC103712547
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 4690191 | 4694200 | - | gene-LOC103712547 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 35,725.60 Da | 71.88 | 61.73 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 196 | 238 | 2.14971E-24 | - |
| Pfam | PF13639 | Ring finger domain | 196 | 238 | 2.2E-12 | IPR001841 |
| Pfam | PF14369 | zinc-ribbon | 13 | 46 | 8.5E-12 | IPR039525 |
| SUPERFAMILY | SSF57850 | RING/U-box | 178 | 242 | 2.87E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 160 | 243 | 4.3E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 197 | 237 | 1.3E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 197 | 238 | 12.445019 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 140 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60360.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_008797320.1 | E3 ubiquitin-protein ligase RZF1-like [Phoenix dactylifera] | 0 |
| Q94AK4 | E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9AWV8 | RING-type E3 ubiquitin transferase OS=Phoenix dactylifera OX=42345 GN=LOC103712547 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology