Basic Information
Locus ID:
gene-LOC103712050
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000204F | 387269 | 396424 | + | gene-LOC103712050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 61,853.94 Da | 49.82 | 81.12 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 69 | 327 | 2.09401E-127 | - |
| CDD | cd00051 | EFh | 447 | 509 | 9.8338E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 448 | 509 | 1.9E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 70 | 328 | 1.2E-74 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 374 | 435 | 1.4E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 356 | 536 | 3.55E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 335 | 2.83E-86 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 337 | 512 | 3.6E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 155 | 2.8E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 156 | 336 | 5.0E-60 | - |
| SMART | SM00220 | serkin_6 | 70 | 328 | 3.7E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 447 | 475 | 5.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 375 | 403 | 1.9E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 483 | 511 | 1.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 411 | 439 | 0.0021 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 70 | 328 | 48.823795 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 407 | 442 | 10.663839 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 371 | 406 | 16.270815 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 479 | 514 | 14.178661 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 443 | 478 | 12.42125 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 492 | 504 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 190 | 202 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 420 | 432 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 76 | 99 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 456 | 468 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 384 | 396 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_008796649.1 | calcium-dependent protein kinase 10-like [Phoenix dactylifera] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CD01 | calcium-dependent protein kinase 10-like OS=Phoenix dactylifera OX=42345 GN=LOC103712050 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology