Basic Information
Locus ID:
gene-LOC103711886
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RING-variant domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000454F | 193566 | 201363 | + | gene-LOC103711886 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 35,073.06 Da | 46.10 | 86.96 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 51 | 102 | 5.18776E-21 | - |
| Pfam | PF12906 | RING-variant domain | 51 | 101 | 1.3E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 46 | 106 | 4.24E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 34 | 114 | 2.5E-18 | IPR013083 |
| SMART | SM00744 | ringv_2 | 50 | 102 | 3.9E-17 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 43 | 108 | 22.072439 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11020.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_008796424.1 | uncharacterized protein LOC103711886 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B7CCS7 | uncharacterized protein LOC103711886 OS=Phoenix dactylifera OX=42345 GN=LOC103711886 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology