Basic Information
Locus ID:
gene-LOC103711767
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 6097310 | 6100065 | - | gene-LOC103711767 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 74,664.53 Da | 58.99 | 71.91 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 501 | 575 | 1.99013E-48 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 64 | 248 | 1.3E-50 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 508 | 553 | 1.4E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 507 | 575 | 3.4E-19 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 496 | 581 | 3.5E-18 | IPR036638 |
| SMART | SM00353 | finulus | 510 | 559 | 7.5E-17 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 504 | 553 | 17.389959 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 514 | - | - |
| Coils | Coil | Coil | 550 | 577 | - | - |
| Coils | Coil | Coil | 330 | 354 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_008796257.2 | transcription factor MYC2 [Phoenix dactylifera] | 0 |
| Q336P5 | Transcription factor MYC2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CCN2 | transcription factor MYC2 OS=Phoenix dactylifera OX=42345 GN=LOC103711767 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology