Basic Information
Locus ID:
gene-LOC103711728
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RING finger and CHY zinc finger domain-containing protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 2421055 | 2427169 | + | gene-LOC103711728 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 30,339.58 Da | 45.64 | 58.32 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14599 | Zinc-ribbon | 196 | 253 | 1.1E-25 | IPR039512 |
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 148 | 190 | 2.1E-8 | - |
| Pfam | PF05495 | CHY zinc finger | 19 | 93 | 4.3E-20 | IPR008913 |
| SUPERFAMILY | SSF57850 | RING/U-box | 147 | 196 | 1.79E-11 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 84 | 141 | 4.05E-20 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 17 | 82 | 9.55E-18 | IPR037274 |
| Gene3D | G3DSA:2.20.28.10 | - | 222 | 257 | 7.1E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 135 | 221 | 2.2E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 148 | 190 | 8.1E-7 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 83 | 147 | 34.10228 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 12 | 81 | 25.66547 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 148 | 191 | 11.899158 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18650.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_038988718.1 | E3 ubiquitin-protein ligase MIEL1 isoform X1 [Phoenix dactylifera] | 0 |
| Q8VZK0 | E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9AY02 | E3 ubiquitin-protein ligase MIEL1 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103711728 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology