Basic Information
Locus ID:
gene-LOC103711620
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000462F | 33368 | 43046 | - | gene-LOC103711620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 60,154.21 Da | 36.26 | 82.46 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 55 | 313 | 9.37462E-143 | - |
| CDD | cd00051 | EFh | 436 | 495 | 1.39459E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 56 | 314 | 5.8E-77 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 361 | 420 | 9.8E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 432 | 495 | 1.6E-13 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 326 | 8.5E-89 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 343 | 518 | 5.71E-43 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 323 | 497 | 3.2E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 45 | 137 | 1.3E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 138 | 322 | 2.3E-59 | - |
| SMART | SM00054 | efh_1 | 397 | 425 | 2.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 361 | 389 | 8.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 433 | 461 | 0.067 | IPR002048 |
| SMART | SM00054 | efh_1 | 469 | 497 | 1.7E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 56 | 314 | 9.5E-103 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 393 | 428 | 9.018011 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 357 | 392 | 15.266581 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 314 | 49.869713 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 429 | 464 | 12.309669 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 465 | 500 | 13.453381 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 406 | 418 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 176 | 188 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 442 | 454 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 85 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 478 | 490 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_008796072.1 | calcium-dependent protein kinase 20-like [Phoenix dactylifera] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7CC40 | calcium-dependent protein kinase 20-like OS=Phoenix dactylifera OX=42345 GN=LOC103711620 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology