Basic Information
Locus ID:
gene-LOC103711453
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000366F | 105291 | 105830 | + | gene-LOC103711453 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 19,772.96 Da | 49.93 | 68.05 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 123 | 166 | 3.72836E-16 | - |
| Pfam | PF13639 | Ring finger domain | 123 | 166 | 6.2E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 115 | 170 | 1.13E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 73 | 170 | 5.6E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 124 | 165 | 5.4E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 124 | 166 | 11.854899 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 100 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G09120.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_008795814.2 | E3 ubiquitin-protein ligase EL5-like [Phoenix dactylifera] | 0 |
| Q9M0R5 | Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8B7CBN4 | RING-type E3 ubiquitin transferase OS=Phoenix dactylifera OX=42345 GN=LOC103711453 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology