Basic Information
Locus ID:
gene-LOC103711353
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
HMT3
Description:
homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 29093480 | 29103107 | - | gene-LOC103711353 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 37,378.43 Da | 36.05 | 87.68 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 24 | 332 | 3.7E-79 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 19 | 335 | 3.14E-83 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 12 | 332 | 4.7E-104 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 298 | 343 | 1.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 10 | 208 | 7.4E-7 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 11 | 333 | 47.516197 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_008795685.2 | homocysteine S-methyltransferase 2-like [Phoenix dactylifera] | 0 |
| Q9FUM8 | Homocysteine S-methyltransferase 3 OS=Zea mays OX=4577 GN=HMT-3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CBE9 | homocysteine S-methyltransferase 2-like OS=Phoenix dactylifera OX=42345 GN=LOC103711353 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology