Basic Information
Locus ID:
gene-LOC103710946
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 33764412 | 33766340 | - | gene-LOC103710946 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 43,330.82 Da | 41.03 | 103.47 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 159 | 178 | 0.051 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 98 | 381 | 5.1E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 204 | 379 | 2.8E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 203 | 5.6E-33 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 159 | 181 | 7.249913 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 160 | 173 | 5.4E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 249 | 262 | 5.4E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_038988396.1 | LRR receptor-like serine/threonine-protein kinase ER2 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B9ANQ8 | LRR receptor-like serine/threonine-protein kinase ER2 OS=Phoenix dactylifera OX=42345 GN=LOC103710946 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology