Basic Information
Locus ID:
gene-LOC103710868
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
CDP-diacylglycerol--inositol 3-phosphatidyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 18021068 | 18032462 | - | gene-LOC103710868 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 25,139.55 Da | 47.61 | 110.18 | 0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01066 | CDP-alcohol phosphatidyltransferase | 16 | 78 | 1.3E-15 | IPR000462 |
| Gene3D | G3DSA:1.20.120.1760 | - | 7 | 173 | 4.5E-25 | IPR043130 |
| PIRSF | PIRSF000848 | CDP_diag_ino_3_P | 1 | 223 | 1.6E-86 | IPR014387 |
| ProSitePatterns | PS00379 | CDP-alcohol phosphatidyltransferases signature. | 56 | 78 | - | IPR000462 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko00562 (Inositol phosphate metabolism)
map00562 (Inositol phosphate metabolism)
ko00564 (Glycerophospholipid metabolism)
map00564 (Glycerophospholipid metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko04070 (Phosphatidylinositol signaling system)
map04070 (Phosphatidylinositol signaling system)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38570.1 | probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2. | 0 |
| RefSeq | XP_008795002.1 | probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 isoform X1 [Phoenix dactylifera] | 0 |
| Q8GUK6 | Probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=PIS2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7CA54 | CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Phoenix dactylifera OX=42345 GN=LOC103710868 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg26134, jg3022, jg30369, jg30370 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_10664, gene_26690 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah030801 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g214000 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12237, Sbi_jg47204 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg21477 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00020447, GOSA_00023586 |
| Amaranthaceae | Suaeda glauca | 8 | Sgl40328, Sgl44713, Sgl49476, Sgl55464, Sgl56106, Sgl61439 ... |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000007989, gene:ENSEOMG00000034535 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7AG0019290, CQ.Regalona.r1.7BG0021910 |
| Apiaceae | Apium graveolens | 5 | Ag10G00145, Ag5G00028, Ag6G00675, Ag6G00677, Ag6G01973 |
| Arecaceae | Cocos nucifera | 1 | COCNU_03G012610 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103710283, gene-LOC103710868 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.2394.V1.1, AsparagusV1_08.1440.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri4G30633, Ftri8G19658 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G68000.1, AT4G38570.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10019092m.g.v1.0, Thhalv10026160m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp5g23020.v2.2, Sp7g37200.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB03g015730.2N, BniB03g042220.2N, BniB03g045360.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1713 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G1858 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g08660 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0370s00004.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g05290 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.320 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00001666 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb1G06765, Lb1G06767, Lb6G29872 |
| Poaceae | Echinochloa crus-galli | 3 | BH06.2426, BH09.909, CH09.1011 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_4BG0350740, gene-QOZ80_6AG0547720 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0197690.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_046401 |
| Poaceae | Oryza coarctata | 3 | Oco03G001320, Oco04G001210, Oco09G006750 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g03110.2, LOC_Os06g29650.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_06G077100, gene-BS78_08G147900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0307438 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G031600, Chr05G009460, Chr10G019960, Chr11G002700 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G791500 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2BG071620 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G469200.1, TraesCS2B02G492100.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb274200_P001, Zm00001eb389940_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-44822, nbis-gene-7811 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g19608, Zma_g21188 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG10.318, evm.TU.LG17.314 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g03740 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.235 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-19482 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-18399, nbisL1-mrna-511 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7053 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000028l.141 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00010771 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8104 |
| Salicaceae | Populus euphratica | 2 | populus_peu08696, populus_peu36655 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132609570 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107027011 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.5462_chr04_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G2195 |
| Zosteraceae | Zostera marina | 1 | Zosma03g35700.v3.1 |