Basic Information
Locus ID:
gene-LOC103710820
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 15571450 | 15605143 | + | gene-LOC103710820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 106,499.85 Da | 49.47 | 84.96 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 766 | 921 | 3.05112E-59 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 320 | 920 | 4.3E-87 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 33 | 138 | 3.5E-21 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 318 | 922 | 8.05E-110 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 11 | 138 | 1.57E-23 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 637 | 929 | 2.5E-57 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 151 | 236 | 6.1E-12 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 307 | 546 | 1.6E-67 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 2 | 150 | 3.4E-34 | - |
| SMART | SM00695 | dusp | 29 | 140 | 6.4E-27 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 320 | 923 | 56.969334 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 10 | 137 | 18.076889 | IPR006615 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 321 | 336 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 865 | 882 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 258 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_008794941.2 | ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Phoenix dactylifera] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B7CA80 | Ubiquitin carboxyl-terminal hydrolase OS=Phoenix dactylifera OX=42345 GN=LOC103710820 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology