Basic Information
Locus ID:
gene-LOC103710509
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 24879124 | 24901276 | - | gene-LOC103710509 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 69,790.73 Da | 50.95 | 92.54 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 122 | 4.01225E-48 | - |
| Pfam | PF03000 | NPH3 family | 212 | 470 | 1.7E-96 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 114 | 3.1E-10 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 114 | 3.61E-19 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 7 | 147 | 3.2E-14 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 127 | 1.3E-6 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 97 | 12.681111 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 212 | 494 | 95.058067 | IPR027356 |
| Coils | Coil | Coil | 542 | 569 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_008794466.2 | BTB/POZ domain-containing protein At1g30440 isoform X1 [Phoenix dactylifera] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B7C9A8 | BTB/POZ domain-containing protein At1g30440 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103710509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology