Basic Information
Locus ID:
gene-LOC103710418
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 2322976 | 2344438 | - | gene-LOC103710418 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 101,066.00 Da | 52.89 | 58.63 | -0.98 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 626 | 670 | 0.00298484 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 40 | 243 | 3.17E-8 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 623 | 664 | 1.3E-7 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 4 | 287 | 8.7E-6 | IPR011989 |
| Gene3D | G3DSA:2.30.30.140 | - | 615 | 671 | 2.0E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 694 | 709 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 888 | 902 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 761 | 837 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 731 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 845 | 868 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 624 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 930 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 609 | 624 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 607 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 746 | 760 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_038983833.1 | uncharacterized protein LOC103710418 [Phoenix dactylifera] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7C924 | uncharacterized protein LOC103710418 OS=Phoenix dactylifera OX=42345 GN=LOC103710418 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology