Basic Information
Locus ID:
gene-LOC103710046
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 6446598 | 6448742 | - | gene-LOC103710046 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 43,055.38 Da | 50.30 | 83.89 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 155 | 197 | 2.12058E-18 | - |
| Pfam | PF13639 | Ring finger domain | 154 | 197 | 1.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 134 | 203 | 7.07E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 130 | 202 | 2.3E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 155 | 196 | 3.9E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 155 | 197 | 12.415513 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 292 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_038984042.1 | RING-H2 finger protein ATL46-like [Phoenix dactylifera] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9AE49 | RING-H2 finger protein ATL46-like OS=Phoenix dactylifera OX=42345 GN=LOC103710046 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology