Basic Information
Locus ID:
gene-LOC103709868
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 2880678 | 2883985 | + | gene-LOC103709868 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 76,888.98 Da | 46.30 | 86.43 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 26 | 256 | 2.18888E-64 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 388 | 664 | 3.60796E-88 | - |
| Pfam | PF00139 | Legume lectin domain | 25 | 264 | 7.6E-52 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 383 | 595 | 4.7E-46 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 23 | 263 | 6.53E-55 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 364 | 698 | 6.56E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 465 | 683 | 3.7E-59 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 23 | 269 | 2.8E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 464 | 2.0E-28 | - |
| SMART | SM00220 | serkin_6 | 382 | 672 | 1.6E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 382 | 673 | 38.392902 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 139 | 145 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 509 | 521 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 388 | 411 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_008793619.2 | L-type lectin-domain containing receptor kinase VIII.1 [Phoenix dactylifera] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7C822 | L-type lectin-domain containing receptor kinase VIII.1 OS=Phoenix dactylifera OX=42345 GN=LOC103709868 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology