Basic Information
Locus ID:
gene-LOC103709490
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 12248127 | 12253006 | + | gene-LOC103709490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 34,160.20 Da | 40.74 | 66.37 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 50 | 307 | 4.0E-87 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 195 | 299 | 1.08E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 194 | 311 | 4.1E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 198 | 300 | 27.374859 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 34 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_008793077.2 | auxin-responsive protein IAA27-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7C6Z7 | Auxin-responsive protein OS=Phoenix dactylifera OX=42345 GN=LOC103709490 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology