Basic Information
Locus ID:
gene-LOC103709055
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Calcium and calcium calmodulin-dependent serine
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 17218813 | 17227105 | + | gene-LOC103709055 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 57,841.62 Da | 44.77 | 95.27 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 437 | 504 | 9.68525E-15 | IPR002048 |
| CDD | cd00051 | EFh | 403 | 462 | 4.55348E-10 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 12 | 301 | 2.18166E-119 | - |
| Pfam | PF13499 | EF-hand domain pair | 435 | 504 | 2.3E-14 | IPR002048 |
| Pfam | PF13202 | EF hand | 404 | 421 | 0.004 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 13 | 302 | 3.4E-59 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 347 | 508 | 5.53E-34 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 317 | 7.96E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 70 | 129 | 1.6E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 345 | 2.0E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 346 | 513 | 7.5E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 49 | 4.2E-6 | - |
| SMART | SM00054 | efh_1 | 400 | 428 | 0.78 | IPR002048 |
| SMART | SM00054 | efh_1 | 478 | 506 | 8.0E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 13 | 302 | 2.4E-89 | IPR000719 |
| SMART | SM00054 | efh_1 | 436 | 464 | 1.4E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 396 | 431 | 9.882769 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 467 | 13.202322 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 13 | 302 | 47.594139 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 474 | 509 | 14.569197 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 409 | 421 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 445 | 457 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 19 | 44 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 487 | 499 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 163 | 175 | - | IPR008271 |
| PRINTS | PR00450 | Recoverin family signature | 404 | 425 | 7.0E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 358 | 377 | 7.0E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 450 | 468 | 7.0E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 428 | 447 | 7.0E-10 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_008792453.1 | calcium and calcium/calmodulin-dependent serine/threonine-protein kinase-like [Phoenix dactylifera] | 0 |
| Q43531 | Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Lilium longiflorum OX=4690 GN=CCAMK PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9ABZ9 | calcium and calcium/calmodulin-dependent serine/threonine-protein kinase-like OS=Phoenix dactylifera OX=42345 GN=LOC103709055 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30168840 |
| Apiaceae | Apium graveolens | 1 | Ag3G02085 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G005670, COCNU_04G005700 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709055 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.1301.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G25598 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1578 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G1608 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1013 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00006959, Pov_00014745 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.1968, BH05.2092, CH05.2164 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0368830, gene-QOZ80_5BG0416380 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0069960.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_013966 |
| Poaceae | Oryza coarctata | 2 | Oco09G012740, Oco10G012820 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g41090.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G240800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0504440, Pt_Chr0504501 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr18G012590, Chr22G005170 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G495900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG045650, gene_TRIDC1BG051680 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G307200.1, TraesCS1B02G318000.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb200350_P004, Zm00001eb306730_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-25330 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g28476 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g28890 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1112 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-6503 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-20877 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21100 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.840 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017089 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-11027, nbisL1-mrna-21129, nbisL1-mrna-21130 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13317 |
| Salicaceae | Populus euphratica | 2 | populus_peu06012, populus_peu19879 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645338 |
| Solanaceae | Solanum chilense | 1 | SOLCI001256100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107028598 |