Basic Information
Locus ID:
gene-LOC103708880
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 2700857 | 2704474 | - | gene-LOC103708880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 107,622.97 Da | 48.78 | 65.94 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 320 | 404 | 6.0281E-29 | - |
| Pfam | PF00855 | PWWP domain | 320 | 403 | 1.6E-17 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 318 | 422 | 9.63E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 310 | 413 | 1.5E-24 | - |
| SMART | SM00293 | PWWP_4 | 320 | 381 | 1.8E-8 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 322 | 383 | 14.912615 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 509 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 787 | 832 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 949 | 996 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 638 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 793 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 623 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 949 | 963 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_008792208.2 | uncharacterized protein LOC103708880 [Phoenix dactylifera] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7C5H9 | uncharacterized protein LOC103708880 OS=Phoenix dactylifera OX=42345 GN=LOC103708880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology