Basic Information
Locus ID:
gene-LOC103708261
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 2453950 | 2457868 | + | gene-LOC103708261 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 120,211.04 Da | 39.64 | 100.85 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 843 | 1111 | 4.18214E-87 | - |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 175 | 215 | 2.8E-6 | IPR025875 |
| Pfam | PF13855 | Leucine rich repeat | 603 | 658 | 3.4E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 78 | 1.9E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 839 | 1037 | 4.2E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 222 | 283 | 2.4E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 347 | 456 | 2.72E-18 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 176 | 711 | 8.16E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 816 | 1108 | 3.64E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 524 | 738 | 5.3E-51 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 341 | 2.7E-75 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 342 | 515 | 6.0E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 801 | 912 | 1.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 913 | 1113 | 5.5E-55 | - |
| SMART | SM00365 | LRR_sd22_2 | 151 | 178 | 320.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 294 | 315 | 330.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 197 | 229 | 290.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 597 | 623 | 110.0 | - |
| SMART | SM00369 | LRR_typ_2 | 173 | 197 | 79.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 621 | 644 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 221 | 245 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 246 | 270 | 120.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 645 | 668 | 50.0 | - |
| SMART | SM00369 | LRR_typ_2 | 597 | 620 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 669 | 692 | 84.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 837 | 1111 | 2.3E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 151 | 172 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 645 | 668 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 19.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 837 | 1111 | 37.643803 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 843 | 871 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 957 | 969 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 766 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_008791323.2 | LRR receptor-like serine/threonine-protein kinase RPK2 [Phoenix dactylifera] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7C455 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Phoenix dactylifera OX=42345 GN=LOC103708261 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology