Basic Information
Locus ID:
gene-LOC103707607
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 30872928 | 30889744 | - | gene-LOC103707607 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 103,599.53 Da | 51.29 | 74.36 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 753 | 904 | 7.86435E-62 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 311 | 903 | 6.3E-82 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 309 | 905 | 1.12E-109 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 643 | 912 | 1.9E-58 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 304 | 531 | 1.7E-65 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 311 | 906 | 56.454342 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 848 | 865 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 312 | 327 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 118 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_038985469.1 | ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Phoenix dactylifera] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B9AQ73 | Ubiquitin carboxyl-terminal hydrolase OS=Phoenix dactylifera OX=42345 GN=LOC103707607 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology