Basic Information
Locus ID:
gene-LOC103707583
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 16595306 | 16598444 | + | gene-LOC103707583 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 55,122.14 Da | 64.23 | 78.45 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 93 | 132 | 1.3E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 95 | 135 | 2.62E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 93 | 132 | 4.8E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 97 | 136 | 9.02057 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_038983538.1 | F-box protein At5g07610-like isoform X1 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B9AHR0 | F-box protein At5g07610-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103707583 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 4 | COCNU_05G001430, COCNU_05G001440, COCNU_05G001460 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103707583 |
| Poaceae | Echinochloa crus-galli | 1 | BH06.615 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_5BG0438530 |
| Poaceae | Oryza coarctata | 4 | Oco23G004760, Oco23G004860, Oco24G004300, Oco24G004520 |
| Poaceae | Oryza sativa | 2 | LOC_Os12g17660.1, LOC_Os12g17710.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G308300, gene-BS78_10G113600 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-36744 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g25035 |