Basic Information
Locus ID:
gene-LOC103707486
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 30770091 | 30777383 | - | gene-LOC103707486 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 51,151.24 Da | 41.59 | 56.86 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 235 | 319 | 6.6E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 142 | - | - |
| Coils | Coil | Coil | 250 | 277 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_008790219.1 | protein WVD2-like 4 [Phoenix dactylifera] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B7C2I7 | protein WVD2-like 4 OS=Phoenix dactylifera OX=42345 GN=LOC103707486 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology