Basic Information
Locus ID:
gene-LOC103707329
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 20104145 | 20113995 | + | gene-LOC103707329 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 78,072.03 Da | 51.20 | 93.79 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 123 | 182 | 2.7E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 57 | 95 | 4.9E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 445 | 673 | 1.4E-19 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 201 | 1.7E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 411 | 672 | 2.6E-40 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 382 | 489 | 1.2E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 682 | 3.0E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 212 | 7.5E-36 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 677 | 18.039944 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 332 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_008789989.3 | protein MALE DISCOVERER 2-like isoform X1 [Phoenix dactylifera] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7C1Z5 | protein MALE DISCOVERER 2-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103707329 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology