Basic Information
Locus ID:
gene-LOC103706808
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 7650262 | 7661718 | - | gene-LOC103706808 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 39,418.64 Da | 55.04 | 90.11 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16474 | RING-H2_RNF111_like | 310 | 354 | 1.14221E-18 | - |
| Pfam | PF13639 | Ring finger domain | 310 | 352 | 4.0E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 300 | 356 | 3.28E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 292 | 359 | 3.9E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 311 | 351 | 1.5E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 311 | 352 | 12.666314 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 150 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68070.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_008789277.1 | E3 ubiquitin protein ligase RIE1 isoform X1 [Phoenix dactylifera] | 0 |
| Q8GUU2 | E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7C0P7 | E3 ubiquitin protein ligase RIE1 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103706808 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology