Basic Information
Locus ID:
gene-LOC103706664
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 10227305 | 10234204 | - | gene-LOC103706664 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 77,887.09 Da | 49.81 | 87.60 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 35 | 261 | 5.15779E-72 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 394 | 672 | 2.99085E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 389 | 603 | 5.7E-46 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 34 | 265 | 7.1E-52 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 32 | 264 | 1.87E-56 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 370 | 703 | 1.37E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 350 | 470 | 9.2E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 471 | 691 | 1.8E-58 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 32 | 269 | 2.8E-58 | - |
| SMART | SM00220 | serkin_6 | 388 | 680 | 1.9E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 388 | 681 | 37.869946 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 394 | 417 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 145 | 151 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 515 | 527 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 311 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_008789069.2 | L-type lectin-domain containing receptor kinase VIII.1-like [Phoenix dactylifera] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7C0H9 | L-type lectin-domain containing receptor kinase VIII.1-like OS=Phoenix dactylifera OX=42345 GN=LOC103706664 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology