Basic Information
Locus ID:
gene-LOC103706650
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 10397574 | 10401688 | + | gene-LOC103706650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 104,633.26 Da | 44.71 | 66.58 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 329 | 409 | 4.43444E-27 | - |
| Pfam | PF00855 | PWWP domain | 327 | 408 | 3.8E-18 | IPR000313 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 878 | 938 | 5.27E-5 | IPR035979 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 322 | 427 | 3.97E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 315 | 419 | 1.4E-25 | - |
| Gene3D | G3DSA:3.30.70.330 | - | 885 | 945 | 2.3E-5 | IPR012677 |
| SMART | SM00293 | PWWP_4 | 325 | 386 | 4.0E-9 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 327 | 388 | 15.404975 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 602 | 642 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 557 | 584 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 798 | 824 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 543 | 642 | - | - |
| Coils | Coil | Coil | 288 | 308 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_008789045.2 | uncharacterized protein LOC103706650 [Phoenix dactylifera] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9ARA0 | uncharacterized protein LOC103706650 OS=Phoenix dactylifera OX=42345 GN=LOC103706650 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology