Basic Information
Locus ID:
gene-LOC103706364
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 9348372 | 9351268 | + | gene-LOC103706364 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 71,617.98 Da | 61.73 | 73.38 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 468 | 544 | 8.59614E-45 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 60 | 239 | 2.6E-50 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 476 | 520 | 2.4E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 474 | 544 | 5.76E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 472 | 548 | 8.9E-17 | IPR036638 |
| SMART | SM00353 | finulus | 477 | 526 | 2.1E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 471 | 520 | 16.82473 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 400 | - | - |
| Coils | Coil | Coil | 510 | 544 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_017698105.2 | transcription factor MYC2-like [Phoenix dactylifera] | 0 |
| Q336P5 | Transcription factor MYC2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7MTW7 | transcription factor MYC2-like OS=Phoenix dactylifera OX=42345 GN=LOC103706364 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology