Basic Information
Locus ID:
gene-LOC103706183
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 4162409 | 4180138 | - | gene-LOC103706183 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 205,206.58 Da | 51.73 | 83.21 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1474 | 1903 | 8.87096E-118 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1576 | 1908 | 1.7E-81 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1466 | 1901 | 3.53E-94 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 190 | 661 | 2.3E-43 | IPR016024 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1780 | 1906 | 2.4E-31 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 524 | 669 | 2.1E-5 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 179 | 491 | 3.7E-53 | IPR011989 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1414 | 1669 | 2.0E-42 | - |
| SMART | SM00185 | arm_5 | 222 | 263 | 120.0 | IPR000225 |
| SMART | SM00119 | hect_3 | 1487 | 1908 | 3.0E-82 | IPR000569 |
| SMART | SM00185 | arm_5 | 305 | 345 | 30.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 348 | 386 | 7.9 | IPR000225 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1571 | 1908 | 57.590908 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1137 | 1176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 972 | 1019 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1139 | 1176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1285 | 1304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 971 | 1086 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 666 | 682 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1053 | 1081 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 666 | 708 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1103 | 1122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 541 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_026660129.2 | E3 ubiquitin-protein ligase UPL3-like [Phoenix dactylifera] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8J3Y3 | HECT-type E3 ubiquitin transferase OS=Phoenix dactylifera OX=42345 GN=LOC103706183 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology