Basic Information
Locus ID:
gene-LOC103706119
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
N-terminal domain of oxidoreductase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 39549027 | 39566000 | + | gene-LOC103706119 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 122,661.62 Da | 36.53 | 84.47 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08295 | double_bond_reductase_like | 804 | 1139 | 0.0 | - |
| Pfam | PF00107 | Zinc-binding dehydrogenase | 964 | 1097 | 6.3E-23 | IPR013149 |
| Pfam | PF00295 | Glycosyl hydrolases family 28 | 57 | 380 | 3.6E-84 | IPR000743 |
| Pfam | PF00295 | Glycosyl hydrolases family 28 | 421 | 742 | 4.7E-79 | IPR000743 |
| Pfam | PF16884 | N-terminal domain of oxidoreductase | 807 | 918 | 5.6E-27 | IPR041694 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | 390 | 755 | 3.14E-105 | IPR011050 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 930 | 1100 | 5.81E-44 | IPR036291 |
| SUPERFAMILY | SSF50129 | GroES-like | 804 | 970 | 1.41E-33 | IPR011032 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | 12 | 393 | 6.13E-118 | IPR011050 |
| Gene3D | G3DSA:3.90.180.10 | - | 809 | 1137 | 1.3E-151 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 932 | 1108 | 1.3E-151 | - |
| Gene3D | G3DSA:2.160.20.10 | - | 391 | 771 | 1.8E-104 | IPR012334 |
| Gene3D | G3DSA:2.160.20.10 | - | 17 | 390 | 4.0E-114 | IPR012334 |
| SMART | SM00829 | PKS_ER_names_mod | 821 | 1137 | 0.0026 | IPR020843 |
| SMART | SM00710 | pbh1 | 543 | 569 | 400.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 323 | 363 | 7500.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 626 | 647 | 260.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 206 | 227 | 1400.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 690 | 730 | 2900.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 593 | 613 | 3100.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 570 | 591 | 6000.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 179 | 205 | 3.5 | IPR006626 |
| SMART | SM00710 | pbh1 | 259 | 280 | 670.0 | IPR006626 |
| ProSitePatterns | PS00502 | Polygalacturonase active site. | 600 | 613 | - | IPR000743 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65560.1 | Zinc-binding dehydrogenase family protein. | 0 |
| RefSeq | XP_008788347.2 | uncharacterized protein LOC103706119 [Phoenix dactylifera] | 0 |
| Q9SLN8 | 2-alkenal reductase (NADP(+)-dependent) OS=Nicotiana tabacum OX=4097 GN=DBR PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7BZ62 | uncharacterized protein LOC103706119 OS=Phoenix dactylifera OX=42345 GN=LOC103706119 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology