Basic Information
Locus ID:
gene-LOC103705579
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 15269408 | 15276654 | + | gene-LOC103705579 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 97,723.01 Da | 44.75 | 81.09 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 800 | 841 | 7.19141E-25 | - |
| CDD | cd01989 | STK_N | 58 | 222 | 1.22383E-42 | - |
| Pfam | PF04564 | U-box domain | 796 | 865 | 1.5E-19 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 510 | 760 | 5.0E-42 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 793 | 865 | 1.5E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 491 | 762 | 9.98E-67 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 68 | 183 | 5.19E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 580 | 795 | 7.0E-47 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 796 | 865 | 2.4E-28 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 486 | 579 | 1.8E-28 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 49 | 185 | 3.2E-8 | IPR014729 |
| SMART | SM00220 | serkin_6 | 507 | 773 | 1.4E-31 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 799 | 862 | 3.4E-29 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 795 | 865 | 36.375286 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 507 | 773 | 33.446003 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 513 | 534 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 625 | 637 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 315 | - | - |
| Coils | Coil | Coil | 336 | 415 | - | - |
| Coils | Coil | Coil | 437 | 478 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_017697851.2 | U-box domain-containing protein 33-like [Phoenix dactylifera] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7MTI6 | U-box domain-containing protein 33-like OS=Phoenix dactylifera OX=42345 GN=LOC103705579 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology