Basic Information
Locus ID:
gene-LOC103704476
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000007F | 3432612 | 3439952 | + | gene-LOC103704476 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 120,912.20 Da | 45.09 | 99.03 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 847 | 1115 | 5.36743E-89 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 157 | 174 | 1.9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 252 | 274 | 0.41 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 79 | 7.5E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 179 | 238 | 1.2E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 647 | 686 | 7.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 844 | 1040 | 1.4E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 578 | 638 | 1.5E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 138 | 716 | 5.44E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 820 | 1112 | 3.1E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 348 | 515 | 7.0E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 117 | 342 | 1.3E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 616 | 737 | 4.6E-33 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 807 | 916 | 1.4E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 520 | 615 | 1.4E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 116 | 2.2E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 917 | 1117 | 1.3E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 226 | 249 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 601 | 624 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 649 | 672 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 155 | 178 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 625 | 648 | 56.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 841 | 1085 | 2.4E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 298 | 322 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 673 | 696 | 33.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 841 | 1120 | 37.46006 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 847 | 869 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 961 | 973 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 649 | 662 | 3.5E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 204 | 217 | 3.5E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 768 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_008785991.2 | LRR receptor-like serine/threonine-protein kinase RPK2 [Phoenix dactylifera] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7BV08 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Phoenix dactylifera OX=42345 GN=LOC103704476 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology