halophFGD

Basic Information

Locus ID: gene-LOC103704379

Species & Taxonomic ID: Phoenix dactylifera & 42345

Genome Assembly: GCF_009389715.1

Description: 40s ribosomal protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold000884F	152995	158132	+	gene-LOC103704379

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.68	20,250.59 Da	51.35	50.66	-0.84

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03501	Plectin/S10 domain	3	94	1.0E-43	IPR005326
Gene3D	G3DSA:1.10.10.10	-	1	104	8.0E-49	IPR036388
MobiDBLite	mobidb-lite	consensus disorder prediction	91	183	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	113	130	-	-

KEGG Pathway

KO Term:

K02947 (small subunit ribosomal protein S10e)

Pathway:

ko03010 (Ribosome) map03010 (Ribosome)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G25740.1	RNA binding Plectin/S10 domain-containing protein.
RefSeq	XP_008785861.1	40S ribosomal protein S10-1 [Phoenix dactylifera]
Swiss-Prot	P0DKK8	Small ribosomal subunit protein eS10z OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1
TrEMBL	A0A8B7BUT2	40S ribosomal protein S10-1 OS=Phoenix dactylifera OX=42345 GN=LOC103704379 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg13947
Aizoaceae	Mesembryanthemum crystallinum	2	gene_14711, gene_3245
Amaranthaceae	Atriplex hortensis	2	Ah004562, Ah030279
Amaranthaceae	Beta vulgaris	2	BVRB_3g053340, BVRB_5g099980
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg38456, Sbi_jg4818, Sbi_jg6566, Sbi_jg7267
Amaranthaceae	Salicornia europaea	2	Seu_jg12744, Seu_jg15356
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00006455
Amaranthaceae	Suaeda glauca	4	Sgl01888, Sgl07066, Sgl65209, Sgl69623
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000005631, gene:ENSEOMG00000006835 ... gene:ENSEOMG00000020512, gene:ENSEOMG00000023609, gene:ENSEOMG00000036563, gene:ENSEOMG00000040007
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.5BG0007120, CQ.Regalona.r1.7AG0022800 ... CQ.Regalona.r1.7BG0025400
Anacardiaceae	Pistacia vera	2	pistato.v30135470, pistato.v30183580
Apiaceae	Apium graveolens	2	Ag10G02583, Ag3G02006
Arecaceae	Cocos nucifera	2	COCNU_01G019180, COCNU_02G010590
Arecaceae	Phoenix dactylifera	4	gene-LOC103701249, gene-LOC103703191, gene-LOC103704379 ... gene-LOC120112461
Asparagaceae	Asparagus officinalis	4	AsparagusV1_02.742.V1.1, AsparagusV1_04.378.V1.1 ... AsparagusV1_09.1109.V1.1, AsparagusV1_10.1809.V1.1
Asteraceae	Flaveria trinervia	3	Ftri18G20885, Ftri4G24507, Ftri8G03980
Brassicaceae	Arabidopsis thaliana	3	AT4G25740.1, AT5G41520.1, AT5G52650.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10014804m.g.v1.0, Thhalv10026365m.g.v1.0 ... Thhalv10027958m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp6g14820.v2.2, Sp7g23770.v2.2
Brassicaceae	Brassica nigra	9	BniB01g024880.2N, BniB02g030350.2N, BniB02g082100.2N ... BniB03g012670.2N, BniB05g011620.2N, BniB05g032220.2N, BniB05g034520.2N, BniB06g059210.2N, BniB08g017210.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq03G0286, Ceq09G1486
Casuarinaceae	Casuarina glauca	3	Cgl03G0332, Cgl03G0369, Cgl09G1577
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno07g01280, gene.Cymno08g07800
Dunaliellaceae	Dunaliella salina	1	Dusal.0053s00007.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g14060, gene.Thate09g01640
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-1625, nbisL1-mrna-8457
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.2785, evm.TU.LG10.1448
Plantaginaceae	Plantago ovata	2	Pov_00010578, Pov_00041024
Plumbaginaceae	Limonium bicolor	3	Lb0G38044, Lb1G03924, Lb3G21086
Poaceae	Echinochloa crus-galli	6	AH02.4604, AH09.1010, BH02.4662, BH09.1082, CH02.4710 ... CH09.1215
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_1AG0047510, gene-QOZ80_1BG0097440 ... gene-QOZ80_4AG0317540, gene-QOZ80_4BG0348940
Poaceae	Lolium multiflorum	2	gene-QYE76_016920, gene-QYE76_058782
Poaceae	Oryza coarctata	5	Oco01G030590, Oco02G031690, Oco04G014160, Oco07G005900 ... Oco08G005900
Poaceae	Oryza sativa	3	LOC_Os01g73160.1, LOC_Os02g34460.2, LOC_Os04g35090.1
Poaceae	Paspalum vaginatum	3	gene-BS78_03G410600, gene-BS78_03G412700 ... gene-BS78_06G095600
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0302687, Pt_Chr0302727, Pt_Chr0600869, Pt_Chr0605886
Poaceae	Sporobolus alterniflorus	8	Chr02G000530, Chr03G023800, Chr05G034250, Chr08G017930 ... Chr23G013020, Chr25G011310, Chr26G006530, Chr30G010890
Poaceae	Thinopyrum elongatum	3	Tel2E01G534300, Tel3E01G842100, Tel4E01G265900
Poaceae	Triticum dicoccoides	8	gene_TRIDC1AG048620, gene_TRIDC1BG053260 ... gene_TRIDC2AG018640, gene_TRIDC2AG043900, gene_TRIDC2BG046580, gene_TRIDC3AG072090, gene_TRIDC3BG083230, gene_TRIDC7AG004620
Poaceae	Triticum aestivum	3	TraesCS2A02G302600.1, TraesCS2B02G318500.1 ... TraesCS2D02G301300.1
Poaceae	Zea mays	7	Zm00001eb024580_P001, Zm00001eb082850_P001 ... Zm00001eb140330_P001, Zm00001eb174410_P001, Zm00001eb362490_P001, Zm00001eb402130_P001, Zm00001eb422490_P001
Poaceae	Zoysia japonica	3	nbis-gene-28090, nbis-gene-37861, nbis-gene-7670
Poaceae	Zoysia macrostachya	3	Zma_g11988, Zma_g19699, Zma_g21283
Portulacaceae	Portulaca oleracea	5	evm.TU.LG01.1438, evm.TU.LG10.494, evm.TU.LG14.1491 ... evm.TU.LG14.720, evm.TU.LG17.497
Posidoniaceae	Posidonia oceanica	2	gene.Posoc05g16800, gene.Posoc05g20370
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_11_RagTag.1436 ... evm.TU.Scaffold_16_RagTag.145
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-12731, nbisL1-mrna-22387, nbisL1-mrna-29254
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-10281, nbisL1-mrna-14436, nbisL1-mrna-5512
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-20345, nbisL1-mrna-2193, nbisL1-mrna-22446
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000008l.51, evm.TU.utg000010l.403 ... evm.TU.utg000022l.403
Rhizophoraceae	Kandelia obovata	3	Maker00000988, Maker00008667, Maker00014337
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-1111, nbisL1-mrna-2330, nbisL1-mrna-3543
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-20550, nbisL1-mrna-6311
Salicaceae	Populus euphratica	4	populus_peu09803, populus_peu13463, populus_peu15802 ... populus_peu24657
Solanaceae	Lycium barbarum	4	gene-LOC132604292, gene-LOC132609088, gene-LOC132611468 ... gene-LOC132645959
Solanaceae	Solanum chilense	2	SOLCI002319400, SOLCI006480400
Solanaceae	Solanum pennellii	2	gene-LOC107007590, gene-LOC107008029
Tamaricaceae	Reaumuria soongarica	2	gene_14765, gene_5230
Tamaricaceae	Tamarix chinensis	3	TC01G3375, TC06G2328, TC08G1541
Zosteraceae	Zostera marina	2	Zosma04g14810.v3.1, Zosma04g16410.v3.1