Basic Information
Locus ID:
gene-LOC103703562
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
ABC transporter C family member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 6890291 | 6910557 | - | gene-LOC103703562 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.51 | 173,874.34 Da | 41.64 | 106.04 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 344 | 632 | 1.29346E-98 | IPR044746 |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 976 | 1270 | 1.25683E-93 | IPR044726 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1293 | 1513 | 7.05955E-124 | - |
| CDD | cd03250 | ABCC_MRP_domain1 | 658 | 858 | 3.81646E-107 | - |
| Pfam | PF00664 | ABC transporter transmembrane region | 1012 | 1222 | 1.6E-28 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 347 | 610 | 6.4E-27 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1312 | 1460 | 5.8E-29 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 676 | 810 | 9.2E-18 | IPR003439 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1288 | 1521 | 3.75E-66 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 335 | 632 | 1.01E-31 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 978 | 1277 | 4.97E-49 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 652 | 876 | 1.95E-56 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1278 | 1531 | 6.3E-80 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 942 | 1276 | 1.5E-56 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 653 | 885 | 3.0E-68 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 318 | 641 | 5.0E-46 | IPR036640 |
| SMART | SM00382 | AAA_5 | 685 | 858 | 3.5E-13 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1321 | 1506 | 2.0E-11 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 348 | 624 | 33.107178 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 658 | 881 | 21.642103 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1297 | 1529 | 16.80686 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 985 | 1258 | 36.320545 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 783 | 797 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 913 | 932 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 901 | 933 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_038975230.1 | putative ABC transporter C family member 15 [Phoenix dactylifera] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B8ZLX9 | putative ABC transporter C family member 15 OS=Phoenix dactylifera OX=42345 GN=LOC103703562 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology