Basic Information
Locus ID:
gene-LOC103703218
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Receptor homology region, transmembrane domain- and RING domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 790103 | 797119 | - | gene-LOC103703218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 31,338.73 Da | 72.49 | 85.31 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02123 | PA_C_RZF_like | 17 | 128 | 6.61836E-42 | IPR044744 |
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 201 | 244 | 7.27212E-23 | - |
| Pfam | PF02225 | PA domain | 31 | 113 | 1.7E-13 | IPR003137 |
| Pfam | PF13639 | Ring finger domain | 201 | 244 | 2.1E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 193 | 252 | 3.03E-18 | - |
| SUPERFAMILY | SSF52025 | PA domain | 50 | 114 | 8.76E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 160 | 250 | 3.1E-19 | IPR013083 |
| Gene3D | G3DSA:3.50.30.30 | - | 8 | 125 | 5.4E-27 | - |
| SMART | SM00184 | ring_2 | 202 | 243 | 6.3E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 202 | 244 | 12.017182 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71980.1 | Protease-associated (PA) RING/U-box zinc finger family protein. | 0 |
| RefSeq | XP_038986623.1 | receptor homology region, transmembrane domain- and RING domain-containing protein 1-like isoform X1 [Phoenix dactylifera] | 0 |
| Q10R93 | Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0167500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9ARK4 | receptor homology region, transmembrane domain- and RING domain-containing protein 1-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103703218 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology