Basic Information
Locus ID:
gene-LOC103702862
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
UPL4
Description:
E3 ubiquitin-protein ligase UPL4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 21509609 | 21520627 | - | gene-LOC103702862 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 171,582.34 Da | 48.63 | 91.16 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1152 | 1546 | 5.5173E-110 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1241 | 1548 | 2.3E-78 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 104 | 535 | 5.76E-34 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1142 | 1541 | 1.44E-92 | IPR035983 |
| Gene3D | G3DSA:1.25.10.10 | - | 94 | 563 | 2.1E-47 | IPR011989 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1094 | 1320 | 1.6E-36 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1430 | 1546 | 1.1E-31 | - |
| SMART | SM00119 | hect_3 | 1164 | 1548 | 1.1E-96 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1166 | 1548 | 61.109573 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 68 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_008783679.1 | E3 ubiquitin-protein ligase UPL4-like [Phoenix dactylifera] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8B7BR63 | HECT-type E3 ubiquitin transferase OS=Phoenix dactylifera OX=42345 GN=LOC103702862 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology