Basic Information
Locus ID:
gene-LOC103702694
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 16590417 | 16600933 | + | gene-LOC103702694 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 55,268.40 Da | 53.01 | 70.59 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 236 | 293 | 8.7E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 318 | 352 | 1.8E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 446 | 482 | 5.9E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 357 | 397 | 0.024 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 194 | 483 | 1.89E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 178 | 487 | 1.7E-123 | IPR015943 |
| SMART | SM00320 | WD40_4 | 272 | 309 | 0.87 | IPR001680 |
| SMART | SM00320 | WD40_4 | 313 | 352 | 8.3E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 355 | 397 | 0.0017 | IPR001680 |
| SMART | SM00320 | WD40_4 | 185 | 226 | 200.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 443 | 482 | 1.7E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 229 | 269 | 0.011 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 450 | 483 | 14.41838 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 237 | 278 | 8.971213 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 450 | 483 | 11.919224 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 320 | 361 | 13.248743 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 320 | 352 | 10.706503 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 469 | 483 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 143 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_008783451.1 | protein FIZZY-RELATED 1-like [Phoenix dactylifera] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7BQT9 | protein FIZZY-RELATED 1-like OS=Phoenix dactylifera OX=42345 GN=LOC103702694 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology