Basic Information
Locus ID:
gene-LOC103702656
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 4656459 | 4658525 | - | gene-LOC103702656 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 31,856.21 Da | 63.35 | 86.63 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 93 | 136 | 1.16473E-18 | - |
| Pfam | PF13639 | Ring finger domain | 93 | 136 | 2.9E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 74 | 141 | 4.29E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 71 | 146 | 2.6E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 94 | 135 | 1.5E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 94 | 136 | 12.208971 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 214 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53820.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_008783397.2 | RING-H2 finger protein ATL3 [Phoenix dactylifera] | 0 |
| P0C035 | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7BQR0 | RING-H2 finger protein ATL3 OS=Phoenix dactylifera OX=42345 GN=LOC103702656 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology