Basic Information
Locus ID:
gene-LOC103702617
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 36968245 | 36975540 | + | gene-LOC103702617 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 66,414.92 Da | 60.07 | 73.90 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18671 | PIN_PRORP-Zc3h12a-like | 408 | 530 | 1.16003E-59 | - |
| Pfam | PF16953 | Protein-only RNase P | 350 | 576 | 1.3E-71 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 100 | 310 | 1.4E-82 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 368 | 542 | 2.9E-237 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 108 | 579 | 2.9E-237 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 222 | 256 | 8.856788 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 187 | 221 | 8.911594 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 113 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_038989250.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Phoenix dactylifera] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7BQK3 | ribonuclease P OS=Phoenix dactylifera OX=42345 GN=LOC103702617 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology