Basic Information
Locus ID:
gene-LOC103702241
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
leucine-rich repeat receptor-like protein kinase At5g49770
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 6976501 | 6983445 | + | gene-LOC103702241 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 111,783.33 Da | 32.30 | 95.25 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 678 | 945 | 3.29113E-94 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 676 | 941 | 1.3E-46 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 94 | 131 | 5.5E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 111 | 457 | 5.1E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 658 | 957 | 2.97E-80 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 344 | 493 | 1.1E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 748 | 963 | 3.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 92 | 343 | 2.2E-61 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 644 | 747 | 1.7E-35 | - |
| SMART | SM00220 | serkin_6 | 672 | 946 | 3.9E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 672 | 946 | 39.071335 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 678 | 700 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 792 | 804 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_038980380.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Phoenix dactylifera] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9A1A8 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103702241 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology