Basic Information
Locus ID:
gene-LOC103701304
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Receptor homology region, transmembrane domain- and RING domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 264880 | 272549 | - | gene-LOC103701304 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 47,382.67 Da | 60.27 | 88.66 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02123 | PA_C_RZF_like | 19 | 167 | 1.74856E-52 | IPR044744 |
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 238 | 281 | 1.77387E-21 | - |
| Pfam | PF02225 | PA domain | 66 | 147 | 6.5E-13 | IPR003137 |
| Pfam | PF13639 | Ring finger domain | 238 | 281 | 1.1E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 218 | 293 | 6.48E-19 | - |
| SUPERFAMILY | SSF52025 | PA domain | 83 | 163 | 6.41E-10 | - |
| Gene3D | G3DSA:3.50.30.30 | - | 28 | 157 | 4.6E-28 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 199 | 287 | 1.3E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 239 | 280 | 4.4E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 239 | 281 | 11.899158 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71980.1 | Protease-associated (PA) RING/U-box zinc finger family protein. | 0 |
| RefSeq | XP_008781537.2 | receptor homology region, transmembrane domain- and RING domain-containing protein 1-like [Phoenix dactylifera] | 0 |
| Q10R93 | Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0167500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7BMG8 | receptor homology region, transmembrane domain- and RING domain-containing protein 1-like OS=Phoenix dactylifera OX=42345 GN=LOC103701304 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology