Basic Information
Locus ID:
gene-LOC103700982
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 8756729 | 8763224 | - | gene-LOC103700982 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 66,794.26 Da | 57.47 | 51.47 | -1.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 467 | 551 | 4.7E-19 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 568 | 599 | 4.5E-7 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 467 | 552 | 9.2E-29 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 436 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 291 | - | - |
| Coils | Coil | Coil | 466 | 493 | - | - |
| Coils | Coil | Coil | 498 | 525 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_008781120.2 | protein starmaker-like [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B7BLR5 | protein starmaker-like OS=Phoenix dactylifera OX=42345 GN=LOC103700982 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology