Basic Information
Locus ID:
gene-LOC103700846
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 20371925 | 20374029 | - | gene-LOC103700846 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 40,721.49 Da | 52.33 | 83.18 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 133 | 176 | 7.77984E-20 | - |
| Pfam | PF13639 | Ring finger domain | 133 | 176 | 6.6E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 113 | 182 | 1.26E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 109 | 182 | 9.6E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 134 | 175 | 1.6E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 134 | 176 | 12.592549 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_026657942.1 | RING-H2 finger protein ATL46 [Phoenix dactylifera] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B8J0T8 | RING-H2 finger protein ATL46 OS=Phoenix dactylifera OX=42345 GN=LOC103700846 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology